Win, Joe; Kamoun, Sophien (2017): Transcriptome assembly of RNA-Seq data from field samples collected during wheat blast epidemic in Bangladesh 2016. figshare. 
https://doi.org/10.6084/m9.figshare.5202457.v2
Retrieved: 09:35, Jul 14, 2017 (GMT)
All reads for each sample were assembled into transcripts using the Trinity software. The assemblies were uploaded without any modification.
Please click on the sample name to download the transcript assemblies.
| Sample Name | Condition | Sequencing Library ID (Total No. Reads) | % of reads mapped to BR32 | No. transcripts | Transcriptome size (Mbp) | Avg. contig length | N50 |
|---|---|---|---|---|---|---|---|
| F2 | Asymptomatic | LIB21745 (82035004) | 0.0% | 161237 | 120.237189 | 745.72 | 1120 |
| F5 | Asymptomatic | LIB21746 (76894006) | 0.0% | 161111 | 125.357778 | 778.08 | 1178 |
| F7 | Asymptomatic | LIB21747 (89671978) | 0.0% | 144736 | 118.761755 | 820.54 | 1254 |
| F12 | Asymptomatic | LIB21748 (68817648) | 0.0% | 155040 | 107.655586 | 694.37 | 1024 |
| 2 | Symptomatic | LIB21749 (74245806) | 0.5% | 211245 | 152.933559 | 723.96 | 1075 |
| 5 | Symptomatic | LIB21750 (93,020,546) | 4.7% | 330668 | 211.949173 | 640.97 | 898 |
| 7 | Symptomatic | LIB21751 (46) | 0.3% | 199513 | 112.534961 | 527.63 | 702 |
| 12 | Symptomatic | LIB21752 (125,821,784) | 11.9% | 397980 | 286.502899 | 719.89 | 1110 |